Laboratory of Computational Proteomics – Tools – Quilts
http://www.fenyolab.org/tools/tools.html
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QUILTS is a tools for creating sample specific protein sequence databased. It uses genomic and transcriptomic information to create comprehensive sample specific protein database that supports the identification of novel proteins, resulting from single nucleotide variants, splice variants and fusion genes.
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Similar to the alleleseq personal genome for proteomics
Fenyo: Nice discussion of Quilts Tools for making up sample specific protein databases to identify novel proteins in cancer. Similar to personal genome construction #kdd2014 #biokdd
Fenyo: Quilts Tools for sample-specific DBs to identify novel proteins in cancer. Similar to personal genome construction #kdd2014 #biokdd